Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015920164.1_cds_XP_016469340.1_61892
CDS Infomation

[gene=LOC107791733] [db_xref=GeneID:107791733] [protein=serine/threonine-protein kinase spk-1] [protein_id=XP_016469340.1] [location=complement(join(46182..46604,46705..46752,50399..51379,52063..52272))] [gbkey=CDS]
Sequence

ATGGCGGAAGAGGAGGAGAGGAACGGAGGCGATCGGAGTGAGACGAGTGACTACACATCG
GAGGACGAAGGTACTGACGATTACAGGCGCGGAGGTTATCACGCTGTACGAATCGGAGAT
ACATTCAAACACGGACGATATGTAGTGCAGAGCAAGCTTGGCTGGGGACACTTTTCAACT
GTTTGGCTCGCTTGGGATACACAAAAATCTAGGTATGTTGCTCTAAAAGTTCAAAAGAGT
GCGCAGCATTACACAGAAGCGGCTATGGATGAGATTACTATCTTAAAGCAGATTGCAGAG
GGAGATCCCGATGACAAGAAGTGTGTGGTAAAACTCTTGGATCACTTTAAGCATTCTGGG
CCGAATGGGCAGCATGTTTGTATGGTATTTGAATACTTGGGGGATAATCTTTTGACTCTA
ATTAAATACTCAGACTATCGAGGGCTAGCGATTAATAAGGTTAAAGAAATTTGCTTCCAC
GTTTTGGTGGGTTTGGATTATTTACATCGTCAGCTTTCTATTATTCACACTGACTTGAAG
CCGGAAAATATTTTGCTATTATCAATGATTGATCAAAGTAAAGATCCGACAAAGTCAGGC
GCTCCCCTTGTTCTCCCTTCTAGTAAAAGTAAGATTCTTTCTGAATCTGGTGCTTCCAAG
GAAGTAAAGAGTTCAAATAGTGACCTGACTAAGAACCAGAAAAAGAAAATTCGGAAAAAG
GCTAAGCGAGCAGCTCAAAGATGTACGGGCAAGGAAGCTTCTGAGGAAACCGAACAAGAT
AATGAAGCCAGTAGTCCTGAAAAGCCTAACCCTGATGAGAAACCCGATAAAGACTCAGTT
GAAGGAAAGACTAATACTAAAGCAAGTGAAGATGGCTCAATGACAGACAGAGCAAGGGAT
GGGCAGCAGAGAACTCAAAGACCTAAAAGAGGCAGCCGATCAGTGAGGCAGAAACTATTG
GCTGATGTGGACCTTAAGTGCAAATTAGTCGACTTTGGTAATGCATGCTGGACATATAAA
CAATTCACAAGTGATATCCAGACAAGACAATACAGATGTCCTGAGGTTATCCTAGGCTCT
AAATATTCTACTTCAGCTGATCTTTGGTCCTTGGCTTGCATTTGCTTTGAGCTTGCCACT
GGTGATGTTCTTTTTGATCCTCACAGTGGTGACAACTATGACAGGGATGAGGATCACTTG
GCCCTAATGATGGAGCTTCTTGGAATGATGCCACGCAAGATTGCCTTAGGTGGGCGCTAT
TCGCGAGAGTTCTTCAACCGATATGGAGACTTGAGGCATATTAGGCGATTGCGGTTCTGG
CCTATAAGCAAAGTGCTTAGGGAAAAGTATGAGTTCAGTGAACAAGATGCTAGTGACATG
GCAGACTTCCTTGTTCCCATACTTGATTTTGTGCCTGAGAAAAGACCTACTGCGGCTCAA
TGTCTCAGTCATCCGTGGATCACTGGAGGCCCTCGGAGTCTTGCTCCTTCTAAAACTGAT
TCTACATCCGAAGCAACTGAAAATGGTGGCTCGGAGAAGAAGAGGGAGAGGGATGAGAGG
GAGGCGATGGAAGTTGGAGTGGGCAATATTGTGATTGATGGAACTGCAAAGCCAGTCAAA
GTTTCTCAATCTGTAAAACCAGCAAAAAGCAGAGTTGATTGA

Peptide Sequence

PEP ID

XP_016469340.1
PEP Infomation

PREDICTED: serine/threonine-protein kinase spk-1 [Nicotiana tabacum]
Sequence

MAEEEERNGGDRSETSDYTSEDEGTDDYRRGGYHAVRIGDTFKHGRYVVQSKLGWGHFST
VWLAWDTQKSRYVALKVQKSAQHYTEAAMDEITILKQIAEGDPDDKKCVVKLLDHFKHSG
PNGQHVCMVFEYLGDNLLTLIKYSDYRGLAINKVKEICFHVLVGLDYLHRQLSIIHTDLK
PENILLLSMIDQSKDPTKSGAPLVLPSSKSKILSESGASKEVKSSNSDLTKNQKKKIRKK
AKRAAQRCTGKEASEETEQDNEASSPEKPNPDEKPDKDSVEGKTNTKASEDGSMTDRARD
GQQRTQRPKRGSRSVRQKLLADVDLKCKLVDFGNACWTYKQFTSDIQTRQYRCPEVILGS
KYSTSADLWSLACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIALGGRY
SREFFNRYGDLRHIRRLRFWPISKVLREKYEFSEQDASDMADFLVPILDFVPEKRPTAAQ
CLSHPWITGGPRSLAPSKTDSTSEATENGGSEKKRERDEREAMEVGVGNIVIDGTAKPVK
VSQSVKPAKSRVD

Transcript Sequence

Gene sequence data has not been registered.